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Custom BIT, CNP, CRE, PSA, ACI, ATR, TLZD, VRE, ESBL (Custom)

Custom panel for Anne Plourde.
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AR Bank #	Organism	Resistance Mechanisms	Biosample Accession #	Main Panel
0001	Escherichia coli	aac(6')-Ib-cr, aadA5, ACRF, catB4, dfrA17, KPC-3, MDF(A), mph(A), OXA-1, sul1, tet(A), tet(R)	SAMN04014842	Enterobacterales Carbapenem Breakpoint (BIT)
0002	Enterobacter cloacae	aac(6')-Ib, aadA1, ACT-45, aph(3')-Ia, aph(3')-Ib, aph(6)-Id, dfrA14, KPC-3, OmpF2, OXA-9, sul2, TEM-1A	SAMN04014843	Enterobacterales Carbapenem Breakpoint (BIT)
0005	Klebsiella pneumoniae	aac(6')-Ib, aph(3')-Ia, catA1, dfrA12, EMRD, KDEA, KPC-2, mph(A), Omp35, OmpK35, oqxA, oqxB, OXA-9, SHV-11, sul1, TEM-1A	SAMN04014846	Enterobacterales Carbapenem Breakpoint (BIT)
0011	Escherichia coli	aac(3)-IIa, aac(6')-Ib-cr, ACRF, aph(6)-Id, catB4, CTX-M-15, dfrA4, EMRD, MDF(A), OXA-1, strA, sul2, tet(A), tet(R)	SAMN04014852	Enterobacterales Carbapenem Breakpoint (BIT)
0012	Klebsiella pneumoniae	aac(3)-Iva, aac(6')-Ib, aadA1, aph(4)-Ia, catA1, cmlA1, dfrA12, EMRD, KDEA, Omp35, OmpK35, oqxA, oqxB, SHV-12, sul1, sul3	SAMN04014853	Enterobacterales Carbapenem Breakpoint (BIT)
0013	Escherichia coli	aac(3)-IId, aadA2, catA1, CTX-M-14, dfrA12, EC-5, EMRD, MDF(A), mph(A), sul1, TEM-1, tet(A), tet(R)	SAMN04014854	Enterobacterales Carbapenem Breakpoint (BIT)
0015	Escherichia coli	aac(3)-IId, aac(6')-Ib-cr, aadA5, ACRF, aph(3')-Ib, aph(6)-Id, catB4, CTX-M-15, dfrA17, EMRD, MDF(A), mph(A), OmpF, OXA-1, sul1, sul2, TEM-1, tet(A), tet(B), tet(R)	SAMN04014856	Enterobacterales Carbapenem Breakpoint (BIT)
0016	Klebsiella pneumoniae	KDEA, LEN-27, oqxA, oqxB9	SAMN04014857	Enterobacterales Carbapenem Breakpoint (BIT)
0021	Citrobacter freundii	CMY-108, QnrB13	SAMN04014862	Enterobacterales Carbapenem Breakpoint (BIT)
0022	Citrobacter freundii	CMY-109, QnrB38	SAMN04014863	Enterobacterales Carbapenem Breakpoint (BIT)
0028	Klebsiella oxytoca	aph(3')-Ia, OXY-1-1	SAMN04014869	Enterobacterales Carbapenem Breakpoint (BIT)
0029	Proteus mirabilis	tet(J)	SAMN04014870	Enterobacterales Carbapenem Breakpoint (BIT)
0039	Klebsiella pneumoniae	aac(3)-IId, aac(6')-Ib-cr, aadA1, aadA2, aph(3")-Ib, aph(6)-Id, ARR-2, catA1, CTX-M-15, dfrA12, dfrA14, EMRD, ere(A), fosA5, KDEA, Omp35, OmpK35, oqxB9, oqxB9, OXA-181, qacEdelta1, SHV-26, sul1, sul2, tet(A), tet(R)	SAMN04014880	Gram Negative Carbapenemase Detection (CarbaNP)
0042	Klebsiella pneumoniae	aac(3)-IIa, aac(6')-Ib-cr, aadA1, aadA5, aph(3')-Ia, ARR-2, catA2, catB4, cmlA5, CTX-M-15, dfrA14, dfrA17, EMRD, erm(42), floR, fosA10, KDEA, mph(A), oqxA10, oqxB19, OXA-1, OXA-10, qacEdelta1, QnrS1, SHV-1, sul1, sul2, TEM-1	SAMN04014883	Gram Negative Carbapenemase Detection (CarbaNP)
0058	Escherichia coli	aac(3)-IId, aadA5, ACRF, aph(3")-Ib, aph(6)-Id, dfrA17, mph(A), qacEdelta1, sul1, sul2, TEM-20, tet(A)	SAMN04014899	Gram Negative Carbapenemase Detection (CarbaNP)
0059	Proteus mirabilis	aadA1, aadA2, ant(2")-la, aph(3')-Ia, dfrA1, qacEdelta1, sat2, sul1, TEM-1, tet(J)	SAMN04014900	Gram Negative Carbapenemase Detection (CarbaNP)
0070	Acinetobacter baumannii	ABAF, ADC-79, ant(3")-IIa, MBL, OXA-100, OXA-58, sul2	SAMN04014911	Gram Negative Carbapenemase Detection (CarbaNP)
0071	Klebsiella oxytoca	Omp36, OmpC, OmpC2, OmpK36, OXY-2-8	SAMN04014912	Gram Negative Carbapenemase Detection (CarbaNP)
0080	Klebsiella pneumoniae	aac(3)-IId, aac(6')-Ib-G, aph(3")-Ib, aph(6)-Id, ARR-3, catB3, IMP-4, KDEA, OKP-B-21, OXA-1, qacEdelta1, qacG2, SFO-1, sul1, TEM-1	SAMN04014921	Gram Negative Carbapenemase Detection (CarbaNP)
0085	Escherichia coli	aadA1, aph(3")-Ib, aph(6)-Id, CMY-2, dfrA1, EMRD, floR, MDTM, OmpF, sat2, sul2, tet(A), tet(B), tet(R)	SAMN04014926	Gram Negative Carbapenemase Detection (CarbaNP)
0086	Escherichia coli	aac(3)-IId, aadA5, ACRF, aph(3")-Ib, aph(6)-Id, CTX-M-14, dfrA17, mph(A), qacEdelta1, sul1, sul2, TEM-1, tet(A)	SAMN04014927	Gram Negative Carbapenemase Detection (CarbaNP)
0097	Klebsiella pneumoniae	aac(6')-Ib, aadA1, aadA2, aph(3")-Ib, aph(6)-Id, dfrA12, dfrA14, EMRD, fosA5, KDEA, KPC-3, oqxA, oqxB, OXA-9, qacEdelta1, SHV-11, sul1, sul2, TEM-1A	SAMN04014938	Gram Negative Carbapenemase Detection (CarbaNP)
0114	Escherichia coli	aadB, cmlA1, dfrA5, KPC-3, strA, strB, sul1, sul2, TEM-1B	SAMN04014955	Enterobacterales Carbapenemase Diversity (CRE)
0116	Citrobacter freundii	aac(6')-If, aadA1, aadB, CMY-76, CMY-79, dfrA1, KPC-2, OmpF, sul1, sul2	SAMN04014957	Enterobacterales Carbapenemase Diversity (CRE)
0118	Escherichia coli	aac(3)-IIa, catA1, CMY-6, dfrA29, NDM-1, OmpF, OXA-2, rmtC, strA, strB, sul1, TEM-1A	SAMN04014959	Enterobacterales Carbapenemase Diversity (CRE)

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